Vibrato is not a fix
A tempting idea, and a wrong one: that vibrato makes a note "sound musical," so a slightly sour note with vibrato on it will pass. It won't. Vibrato wobbles whatever is underneath it. A flat note with vibrato is a flat note that also shakes. Worse — vibrato hides the error from your own ear, so you stop noticing it and stop fixing it.
Why it hides the error
Your ear judges a wobbling pitch by its average. A slow, wide wobble smears that average across
a range wide enough that a 10-cent error disappears inside it — you can't hear your own
mistake any more. This is the exact reason Stage 1 said play the note cleanly, without
vibrato, while you learn where it lives (landing-in-tune): the clean note is the one your
ear can check.
The order is always: centre first, then shimmer
Place the note. Check it — against a ringing open string, a drone, the pitch in your head. Then, once it's genuinely in tune, add the vibrato around that centre. Never the other way round. Even concert players practise scales and hard passages senza vibrato precisely to keep their intonation honest — the vibrato goes back on afterwards.
This is also why vibrato waits until now. Playing by ear (PRD.md §3) depends on the loop of
play a guess, hear the error, correct it. Vibrato breaks that loop if you add it too early —
you stop hearing the errors.
Try it
Try
Take any short phrase you know. Play it through with no vibrato at all, slowly, fixing every note against an open string or a drone until it's genuinely clean. Only then play it again with vibrato on the long notes. If the vibrato'd version sounds worse, the notes weren't actually in tune — go back to the plain version.
The usual mistake
Reaching for vibrato on every note, early, to sound expressive — which is both a technical trap (your intonation quietly rots) and, historically, a style fault. Leopold Mozart's complaint about players who "tremble on every note as if they had the palsy" is the next lesson; the point here is simpler: vibrato is a choice you add to a note that is already right.